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Patrick Marks

10X Genomics (United States) US

ORCID 0000-0002-3231-7163
28
Publications
11,712
Citations
17
H-Index
20
i10-Index
0
2yr Mean Cite
-
Cite/Paper
Data combined from OpenAlex + Semantic Scholar. OA = OpenAlex S2 = Semantic Scholar
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Publication & Citation Trends

Most Cited Works

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
Chen-Shan Chin, David H. Alexander, Patrick Marks, Aaron A. Klammer, James Drake +7 more
Nature Methods 2013
4,307
Real-Time DNA Sequencing from Single Polymerase Molecules
John Eid, Adrian Fehr, Jeremy Gray, Khai Luong, John Lyle +49 more
Science 2008
3,785
Multi-platform discovery of haplotype-resolved structural variation in human genomes OA
Mark Chaisson, Ashley D. Sanders, Xuefang Zhao, Ankit Malhotra, David Porubský +92 more
Nature Communications 2019
1,027
Haplotyping germline and cancer genomes with high-throughput linked-read sequencing OA
Grace Zheng, Billy T. Lau, Michael Schnall-Levin, Mirna Jarosz, John Bell +53 more
Nature Biotechnology 2016
795
Resolving the full spectrum of human genome variation using Linked-Reads OA
Patrick Marks, Sarah Garcia, Álvaro Martínez Barrio, Kamila Belhocine, Jorge Bernate +39 more
Genome Research 2019
306

Publications

28 total

A meta‐analysis evaluating risk factors for compound free flaps for upper extremity defect reconstruction comparing complications and functional outcomes of compound free flaps with and without bone components OA

Ying Zhang, E. Gazyakan, G. Hundeshagen, S. Fischer, A. Bigdeli - Microsurgery, 2021
Cited by 3 Semantic Scholar

scHLAcount: allele-specific HLA expression from single-cell gene expression data PDF

Charlotte A. Darby, Michael J. T. Stubbington, Patrick Marks, Álvaro Martínez Barrio, Ian T. Fiddes - Bioinformatics, 2020
Cited by 30 OpenAlex

Multi-platform discovery of haplotype-resolved structural variation in human genomes PDF

Mark Chaisson, Ashley D. Sanders, Xuefang Zhao, Ankit Malhotra, David Porubský et al. - Nature Communications, 2019
Cited by 1,027 OpenAlex

Resolving the full spectrum of human genome variation using Linked-Reads PDF

Patrick Marks, Sarah Garcia, Álvaro Martínez Barrio, Kamila Belhocine, Jorge Bernate et al. - Genome Research, 2019
Cited by 306 OpenAlex

Human-specific tandem repeat expansion and differential gene expression during primate evolution PDF

Arvis Sulovari, Ruiyang Li, Peter A. Audano, David Porubský, Mitchell R. Vollger et al. - Proceedings of the National Academy of Sciences, 2019
Cited by 155 OpenAlex

Multi-platform discovery of haplotype-resolved structural variation in human genomes PDF

Mark Chaisson, Ashley D. Sanders, Xuefang Zhao, Ankit Malhotra, David Porubský et al. - bioRxiv (Cold Spring Harbor Laboratory), 2017
Cited by 157 OpenAlex

Resolving the Full Spectrum of Human Genome Variation using Linked-Reads PDF

Patrick Marks, Sarah Garcia, Álvaro Martínez Barrio, Kamila Belhocine, Jorge Bernate et al. - bioRxiv (Cold Spring Harbor Laboratory), 2017
Cited by 40 OpenAlex

Haplotyping germline and cancer genomes with high-throughput linked-read sequencing PDF

Grace Zheng, Billy T. Lau, Michael Schnall-Levin, Mirna Jarosz, John Bell et al. - Nature Biotechnology, 2016
Cited by 795 OpenAlex

A hybrid approach for de novo human genome sequence assembly and phasing

Yulia Mostovoy, Michal Levy‐Sakin, Jessica Lam, Ernest T. Lam, Alex Hastie et al. - Nature Methods, 2016
Cited by 248 OpenAlex

HLA Typing for the Next Generation PDF

Neema P. Mayor, James Robinson, Alasdair McWhinnie, Swati Ranade, Kevin Eng et al. - PLoS ONE, 2015
Cited by 152 OpenAlex

Research Topics

Genomics and Phylogenetic Studies (14) RNA and protein synthesis mechanisms (7) Genomics and Rare Diseases (5) Genomic variations and chromosomal abnormalities (4) T-cell and B-cell Immunology (3)

Frequent Co-Authors

JO
Jonas Korlach
6 joint publications
SO
Sofia Kyriazopoulou-Panagiotopoulou
6 joint publications
CH
Chen-Shan Chin
5 joint publications
DE
Deanna M. Church
5 joint publications
HA
Haynes Heaton
5 joint publications
EV
Evan E. Eichler
4 joint publications

Affiliations

University of Illinois Urbana-Champaign
US 2005 - 2005
University of Rhode Island
US 2015 - 2012
Cornell University
US 2008 - 2008
10X Genomics (United States)
US 2022 - 2015
Pacific Biosciences (United States)
US 2015 - 2008

External Profiles

OpenAlex Profile Semantic Scholar Profile ORCID Profile Google Scholar

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