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Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Evan Bolyen, Jai Ram Rideout, Matthew R. Dillon, Nicholas A. Bokulich, Christian C. Abnet, Gabriel A. Al‐Ghalith, Harriet Alexander, Eric J. Alm, Manimozhiyan Arumugam, Francesco Asnicar, Yang Bai, Jordan E. Bisanz, Kyle Bittinger, Asker Brejnrod, Colin Brislawn, C. Titus Brown, Benjamin J. Callahan, Andrés Mauricio Caraballo‐Rodríguez, John Chase, Emily K. Cope, Ricardo Silva, Christian Diener, Pieter C. Dorrestein, Gavin M. Douglas, Daniel M. Durall, Claire Duvallet, Christian F. Edwardson, Madeleine Ernst, Mehrbod Estaki, Jennifer Fouquier, Julia M. Gauglitz, Sean M. Gibbons, Deanna L. Gibson, Antonio González, Kestrel Gorlick, Jiarong Guo, Benjamin Hillmann, Susan Holmes, Hannes Holste, Curtis Huttenhower, Gavin Huttley, Stefan Janssen, Alan K. Jarmusch, Lingjing Jiang, Benjamin D. Kaehler, Kyo Bin Kang, Christopher R. Keefe, Paul Keim, Scott T. Kelley, Dan Knights, Irina Koester, Tomasz Kościółek, Jorden Kreps, Morgan G. I. Langille, Joslynn S. Lee, Ruth E. Ley, Yongxin Liu, Erikka Loftfield, Catherine Lozupone, Massoud Maher, Clarisse Marotz, Bryan D Martin, Daniel McDonald, Lauren J. McIver, Alexey V. Melnik, Jessica L. Metcalf, Sydney Morgan, Jamie Morton, Ahmad Turan Naimey, José A. Navas-Molina, Louis‐Félix Nothias, Stephanie B. Orchanian, Talima Pearson, Samuel L Peoples, Daniel Petras, Mary L. Preuss, Elmar Pruesse, Lasse Buur Rasmussen, Adam R. Rivers, Michael S. Robeson, Patrick Rosenthal, Nicola Segata, Michael Shaffer, Arron Shiffer, Rashmi Sinha, Se Jin Song, John R. Spear, Austin D. Swafford, Luke Thompson, Pedro J. Torres, Pauline Trinh, Anupriya Tripathi, Peter J. Turnbaugh, Sabah Ul-Hasan, Justin J. J. van der Hooft, Fernando Vargas, Yoshiki Vázquez‐Baeza, Emily Vogtmann, Max von Hippel, William A. Walters, Yunhu Wan, Mingxun Wang, Jonathan Warren, Kyle C. Weber, Charles H. D. Williamson, Amy D. Willis, Zhenjiang Zech Xu, Jesse Zaneveld, Yilong Zhang, Qiyun Zhu, Rob Knight, J. Gregory Caporaso

Nature Biotechnology, 2019

Northern Arizona University, National Cancer Institute, University of Minnesota, Woods Hole Oceanographic Institution, University of California, Davis, Massachusetts Institute of Technology, University of Copenhagen, Novo Nordisk Foundation, University of Trento, Chinese Academy of Sciences, State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, University of Chinese Academy of Sciences, University of California, San Francisco, Children's Hospital of Philadelphia, Pacific Northwest National Laboratory, North Carolina State University, University of California San Diego, University of Montana, Institute for Systems Biology, Dalhousie University, University of British Columbia, University of British Columbia, Okanagan Campus, Okanagan University College, Shedd Aquarium, Statens Serum Institut, University of Colorado Anschutz Medical Campus, University of Washington, Michigan State University, Palo Alto University, Stanford University, Broad Institute, Harvard University, Australian National University, Heinrich Heine University Düsseldorf, University of Canberra, UNSW Sydney, ACT Government, Sookmyung Women's University, San Diego State University, Biotechnology Institute, Scripps Institution of Oceanography, Howard Hughes Medical Institute, Cornell University, Max Planck Institute for Developmental Biology, Colorado State University, Google (United States), University of Washington Bothell, Syracuse University, Webster University, Agricultural Research Service, United States Department of Agriculture, University of Arkansas for Medical Sciences, Colorado School of Mines, National Oceanic and Atmospheric Administration, NOAA Atlantic Oceanographic and Meteorological Laboratories, Northern Gulf Institute, University of Southern Mississippi, University of California, Merced, Wageningen University & Research, University of Arizona, Environment Agency, University of Florida, Merck & Co., Inc., Rahway, NJ, USA (United States)

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