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Seyone Chithrananda

University of California, Berkeley US

ORCID iD 0000-0002-3671-9135
16
Publications
567
Citations
5
H-Index
4
i10-Index
3.23
2yr Mean Cite
-
Cite/Paper
Data combined from OpenAlex + Semantic Scholar. OA = OpenAlex S2 = Semantic Scholar
Verify on Google Scholar

Publication & Citation Trends

Most Cited Works

ChemBERTa: Large-Scale Self-Supervised Pretraining for Molecular Property Prediction OA
Seyone Chithrananda, Gabriel Grand, Bharath Ramsundar
arXiv (Cornell University) 2020
384
ChemBERTa-2: Towards Chemical Foundation Models OA
Walid Ahmad, Elana P. Simon, Seyone Chithrananda, Gabriel Grand, Bharath Ramsundar
arXiv (Cornell University) 2022
137
RNA language models predict mutations that improve RNA function OA
Yekaterina Shulgina, Marena Trinidad, Conner J. Langeberg, Hunter Nisonoff, Seyone Chithrananda +11 more
Nature Communications 2024
16
RNA language models predict mutations that improve RNA function OA
Yekaterina Shulgina, Marena Trinidad, Conner J. Langeberg, Hunter Nisonoff, Seyone Chithrananda +11 more
bioRxiv (Cold Spring Harbor Laboratory) 2024
11
Functional protein mining with conformal guarantees OA
Ron Boger, Seyone Chithrananda, Anastasios N. Angelopoulos, Peter H. Yoon, Michael I. Jordan +1 more
Nature Communications 2025
6

Publications

16 total

ChemBERTa-3: an open source training framework for chemical foundation models PDF

Riya Singh, Aryan Amit Barsainyan, Rida Irfan, Connor Joseph Amorin, Stewart He et al. - Digital Discovery, 2026
Cited by 1 OpenAlex

Protein-vec trained model for Functional Protein Mining with Conformal Guarantees (preservation copy for reproducibility) PDF

Ron Boger, Seyone Chithrananda, Anastasios N. Angelopoulos, Peter Yoon, Michael Jordan et al. - Zenodo (CERN European Organization for Nuclear Research), 2026
Cited by 0 OpenAlex

Functional protein mining with conformal guarantees PDF

Ron Boger, Seyone Chithrananda, Anastasios N. Angelopoulos, Peter H. Yoon, Michael I. Jordan et al. - Nature Communications, 2025
Cited by 6 OpenAlex

ChemBERTa-3: An Open Source Training Framework for Chemical Foundation Models PDF

Riya Singh, Aryan Amit Barsainyan, Rida Irfan, Connor Joseph Amorin, Stewart He et al. - ChemRxiv, 2025
Cited by 3 OpenAlex

ChemBERTa-3: An Open Source Training Framework for Chemical Foundation Models PDF

Riya Singh, Aryan Amit Barsainyan, Rida Irfan, Connor Joseph Amorin, Stewart He et al. - ChemRxiv, 2025
Cited by 2 OpenAlex

ChemBERTa-3: An Open Source Training Framework for Chemical Foundation Models PDF

Riya Singh, Aryan Amit Barsainyan, Rida Irfan, Connor Joseph Amorin, Stewart He et al. - Zenodo (CERN European Organization for Nuclear Research), 2025
Cited by 0 OpenAlex

ChemBERTa-3: An Open Source Training Framework for Chemical Foundation Models PDF

Riya Singh, Aryan Amit Barsainyan, Rida Irfan, Connor Joseph Amorin, Stewart He et al. - Zenodo (CERN European Organization for Nuclear Research), 2025
Cited by 0 OpenAlex

ChemBERTa-3: An Open Source Training Framework for Chemical Foundation Models PDF

Riya Singh, Aryan Amit Barsainyan, Rida Irfan, Connor Joseph Amorin, Stewart He et al. - Zenodo (CERN European Organization for Nuclear Research), 2025
Cited by 0 OpenAlex

RNA language models predict mutations that improve RNA function PDF

Yekaterina Shulgina, Marena Trinidad, Conner J. Langeberg, Hunter Nisonoff, Seyone Chithrananda et al. - Nature Communications, 2024
Cited by 16 OpenAlex

RNA language models predict mutations that improve RNA function PDF

Yekaterina Shulgina, Marena Trinidad, Conner J. Langeberg, Hunter Nisonoff, Seyone Chithrananda et al. - bioRxiv (Cold Spring Harbor Laboratory), 2024
Cited by 11 OpenAlex

Research Topics

Computational Drug Discovery Methods (8) Machine Learning in Materials Science (8) Genomics and Phylogenetic Studies (3) Protein Structure and Dynamics (3) Chemistry and Chemical Engineering (3)

Frequent Co-Authors

BH
Bharath Ramsundar
8 joint publications
WA
Walid Ahmad
7 joint publications
AR
Aryan Amit Barsainyan
6 joint publications
RI
Rida Irfan
6 joint publications
CO
Connor Joseph Amorin
6 joint publications
ST
Stewart He
6 joint publications

Affiliations

Microsoft (United States)
US 2024 - 2024
Howard Hughes Medical Institute
US 2024 - 2024
University of Toronto
CA 2021 - 2020
Innovative Genomics Institute
US 2025 - 2024
University of California, Berkeley
US 2026 - 2024

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